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Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Xenopus laevis
,
Gallus gallus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Anolis carolinensis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Taeniopygia guttata
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Rana catesbeiana
,
Cynops pyrrhogaster
,
Ambystoma tigrinum tigrinum
,
Cavia porcellus
,
Bos indicus
,
Meleagris gallopavo
,
Lonchura striata domestica
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST025941
species:
Gallus gallus
miRNA family:
mir-124
source:
miRBase, original name:
gga-mir-124a-2
(
MI0008210
)
Taxonomy by NCBI:
Gallus gallus
Gallus
Phasianinae
Phasianidae
Galliformes
Neognathae
Aves
Coelurosauria
Theropoda
Saurischia
Dinosauria
Archosauria
Sauria
Sauropsida
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTAAGGCACGCGGTGAATGCCA
miRNA*
CGTGTTCACAGCGGACCTTGATT
mismatches:
4
bulges:
1
View larger
pre-miRNA
CCGAGCCTCTCTCTG
CGTGTTCACAGCGGACCTTGATT
TAATGTCCATACAA
TTAAGGCACGCGGTGAATGCCA
AGAGAGGAGCCTCACAGCTTCATT
dot-bracket secondary structure
..((((..(((((((
.((((((((.(((..((((((((
............))
))))))..))).))))))))).
))))))..).)))...........
SIMILARITIES
miRBase
tgu-mir-124-3
:
5e-40
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-124: 1e-28
Identical with:
cfa-mir-124-3
from miRBase (
MNEST026688
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Shao P, Zhou H, Xiao ZD, He JH, Huang MB, Chen YQ, Qu LH,
Gene. 418:34-40(2008).
,
"Identification of novel chicken microRNAs and analysis of their genomic organization"