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Species belonging to selected taxon:
Theobroma cacao
ABOUT THIS RECORD
ID:
MNEST002719
species:
Theobroma cacao
miRNA family:
MIR838
source:
miRNEST
Taxonomy by NCBI:
Theobroma cacao
Theobroma
Byttnerioideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTCTTCTTCTTGTTGCATG
miRNA*
GAGAACAAGAACAAGGACAAG
mismatches:
5
bulges:
0
View larger
pre-miRNA
CTTCCTCGAACA
GAGAACAAGAACAAGGACAAG
ATACCAAGGAAGGAGGAGAAGACGGTGGTTTAGACCTCAAGCTTTCTTTGTAGTGAACT
TTTTCTTC
TTCTTGTTGCATG
TTCAAAAGA
dot-bracket secondary structure
.......(((((
...((((((((.(((((.(((
.((((((((((((..(((.((((....))))....)))...)))))))))..)))..))
).))))).
))))))))...))
)))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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