miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007974
species: Homo sapiens
miRNA family: mir-375
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGTTCTTTTGGCTTAAGAT

miRNA*
CTGAAGTCGGGTAGCATGAT

mismatches: 4
bulges: 1

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pre-miRNA
GCCTTGTAGTATAGTCTGAAGTCGGGTAGCATGATGCCTCCAGCTTTGTTCTTTTGGCTTAAGATTGACTTGGCGAT

dot-bracket secondary structure
(((....(((.((((((.((((((((.((((....((.....))..))))..)))))))).))))))))).)))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|P08548|LIN1_NYCCO: 0.0002

RFAM 7SK: 0.00006
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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