miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Cavia porcellus
,
Bos indicus
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST032023
species:
Mus musculus
miRNA family:
mir-344
source:
miRBase, original name:
mmu-mir-344f
(
MI0014098
)
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCTAGCCAGGACCTGACTAC
miRNA*
AGTCAGTCTCCTGGCTGGAGTC
mismatches:
3
bulges:
1
View larger
pre-miRNA
CC
AGTCAGTCTCCTGGCTGGAGTC
CAGCTCTAAGCTGGTTCCAGG
CTCTAGCCAGGACCTGACTAC
AA
dot-bracket secondary structure
..
((((((..((((((((((((((
((((.....)))))......)
)))))))))))).))))))..
..
SIMILARITIES
miRBase
mmu-mir-344f
:
4e-33
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-344: 7e-32
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP,
Genes Dev. 24:992-1009(2010).
,
"Mammalian microRNAs: experimental evaluation of novel and previously annotated genes"