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Species belonging to selected taxon:
Mus musculus
,
Sus scrofa
,
Bos taurus
,
Rattus norvegicus
,
Canis lupus familiaris
,
Ovis aries
,
Macaca fascicularis
,
Trichosurus vulpecula
,
Papio anubis
,
Homo sapiens
,
Peromyscus maniculatus bairdii
,
Pongo abelii
,
Ursus americanus
,
Equus caballus
,
Oryctolagus cuniculus
,
Macaca nemestrina
,
Cavia porcellus
,
Bos indicus
,
Bos sp.
,
Macropus eugenii
,
Peromyscus polionotus subgriseus
,
Capra hircus
,
Pan troglodytes verus
,
Macaca mulatta
ABOUT THIS RECORD
ID:
MNEST007686
species:
Trichosurus vulpecula
miRNA family:
miR-1279
source:
miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula
Trichosurus
Phalangeridae
Diprotodontia
Metatheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATATTGCTTCTTAGTTCTG
miRNA*
CGATTATAGCTATATGACA
mismatches:
4
bulges:
2
View larger
pre-miRNA
TTATATTATTATAGTCATTGT
TCATATTGCTTCTTAGTTCTG
CTTACCTTGTTCTGTAACAGTTTACAAGTCTCTGTTTCTCTGAAGTCTGTATATTGTT
TGTTACAGTACAATAATGTT
CGATTATAGCTATATGACA
CCCTTTGTCTAGCCATTC
dot-bracket secondary structure
...........(((.((..((
((((((.(((...(((((..(
(.....((((.(((((((((..((((.(...((..........)).)))))......)
)))))))).))))....)).
.))))).))).)))))).)
)....)).))).......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record