miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Trichosurus vulpecula



ABOUT THIS RECORD

ID: MNEST007689
species: Trichosurus vulpecula
miRNA family: mir-1271
source: miRNEST

Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTGGCACGTAGTAAGCACTT

miRNA*
ATTCCTTCTATGTGCCAGGCA

mismatches: 3
bulges: 2

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pre-miRNA
TCAACAAAGTGCCTGGCACGTAGTAAGCACTTAATAAATTTTGATTGATTGATTGAGTTCTGAACAAACTTCCAACCAATGAGCAGACCTTCATAATAAG
GAAGAGTTAAACCATAGCAACTGATGCAATAGTCACTCAAAACATTTTTATTAAATTCCTTCTATGTGCCAGGCATTGTGCTT


dot-bracket secondary structure
....((.((((((((((((((((.(((...((((((((((((((.((((((..((.(((...(((...(((((.....(((((......))))).....)
)))).))).)))))..(((.....)))..)))))).))))))....))))))))....))))))))))))))))))).))...



SIMILARITIES
miRBase hsa-mir-1271: 0.0001

PMRD no hits

microPC no hits
UniProt no hits

RFAM SNORA7: 0.0002
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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