miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Medicago sativa
,
Trifolium pratense
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST008345
species:
Medicago truncatula
miRNA family:
MIR2587
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGACCATTCATATGAACCCT
miRNA*
GGTTCATATAATGGTCAACA
mismatches:
0
bulges:
1
View larger
pre-miRNA
TCAGTGGTGTCATGGTCATTG
TTGACCATTCATATGAACCCT
GCAATTGCATTGCAGCTTGTGTGG
GGTTCATATAATGGTCAACA
GAGACCCTTGACAT
CAAA
dot-bracket secondary structure
....((((((((.((((.(((
(((((((((.(((((((((((
(((.((((...))))....)))))
))))))))))))))))))))
).))))..))))))
))..
SIMILARITIES
miRBase
mtr-MIR2587f
:
5e-43
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
MIR2587: 5e-37
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record