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Species belonging to selected taxon:

Medicago sativa, Trifolium pratense, Medicago truncatula



ABOUT THIS RECORD

ID: MNEST002755
species: Trifolium pratense
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACTCCCTTCGTCCCAAAATAT

miRNA*
ATTTAGGGACAGAGGGAGTAA

mismatches: 2
bulges: 0

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pre-miRNA
TGCAGTATGGAACTCCCTTCGTCCCAAAATATAAATAAAAAGTGGTCAATCAAAGTGGATGTATTTAGGGACAGAGGGAGTAATGCAGCAT

dot-bracket secondary structure
(((.((((...((((((((.(((((.(((((((..((.....(((....)))...))..))))))).))))).)))))))).)))).))).


SIMILARITIES
miRBase no hits

PMRD osa-miRf11624-akr: 0.00007

microPC no hits
UniProt no hits

RFAM MIR1122: 0.00002
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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