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Species belonging to selected taxon:
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST001006
species:
Hordeum vulgare
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA
miRNA*
AGGATGAGTGAAGAGGATG
mismatches:
4
bulges:
2
View larger
pre-miRNA
CGGCGGCGGCGGCGAGGAGGAGG
AGGATGAGTGAAGAGGATG
ATCTGAGCGGAGAGGAGTTTAGGAGGAAAGGTGANNGCGTTATTNGCAAGCAGAAAGG
GTTTCCTGAGGCAGAGAGTCANGCTGTAGTTTTGACAAATCAGTCGAATTCTCTGNTAGAGCAAATAAAAAACAGAGCAAAGCCGAGTTTTTAATCTAAT
GTTATTACTACTACATAAATCTGCTTTGCTTTGAATA
TCATCATCATCATCATCATCA
TCATCATCGGGTAAATAGAG
dot-bracket secondary structure
..((....))..(((.((.((.(
(.(((((((((.((.((((
.((.((((((((.(((.((((..((....(((((..((((((((.((...(((.((..
..)).)))..)).))..((....(((.((.((((((......))))))....))..))).))..((.((((((...((...))...)))))).)).))))
))..))))).))...))))))).)))))))).)).))
)).)).))))..))))).)).
)).)).)))...........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record