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Species belonging to selected taxon:

Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000996
species: Hordeum vulgare
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTGGGACAGAGGGAGTATG

miRNA*
TACTCCCTCCGTATCAAAATA

mismatches: 2
bulges: 0

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pre-miRNA
GATAATAGTTTTGTACTCCCTCCGTATCAAAATAAGTGTCGCTGATCCTAGTATAAAATTTGTACTAATTTAGTCATCACTTTGTGACACTTATTTTGGG
ACAGAGGGAGTATG
CCGAACTTCT


dot-bracket secondary structure
......((((((((((((((((.((.((((((((((((((((((((..((((((((...)))))))).....)))).......)))))))))))))))).
)).)))))))))))
..)))))...



SIMILARITIES
miRBase osa-MIR1862d: 0.00002

PMRD osa-miRf11090-akr: 0.000006

microPC miR1439: 0.00002
UniProt no hits

RFAM MIR1122: 2e-40
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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