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Species belonging to selected taxon:
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST006175
species:
Triticum aestivum
miRNA family:
MIR1439
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGGACAGAGGGAGTAGT
miRNA*
TACTCCCTCCGTCCCAAAATA
mismatches:
3
bulges:
0
View larger
pre-miRNA
CAGTGTTCACAAA
TACTCCCTCCGTCCCAAAATA
TAAGAACGCTTTTTATACTAGCATAGTGTCAAAAACGTTCTTATA
TTTTGGGACAGAGGGAGTAGT
TAATAGTAGT
dot-bracket secondary structure
...((((.((...
(((((((((.(((((((((((
((((((((.((((.((((((...)))))).)))).))))))))))
))))))))).)))))))))))
.)))).....
SIMILARITIES
miRBase
tae-MIR1120
:
0.0000000004
PMRD
tae-miR1120
:
0.0000000004
microPC
miR1439
:
1e-19
UniProt
no hits
RFAM
MIR1122: 5e-25
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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