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Species belonging to selected taxon:
Vigna unguiculata
ABOUT THIS RECORD
ID:
MNEST007539
species:
Vigna unguiculata
miRNA family:
MIR162
source:
miRNEST
Taxonomy by NCBI:
Vigna unguiculata
Vigna
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCA
miRNA*
GAGGCAGCGGTTCATCGATC
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGGAGATGAGGTGAAGTCACTG
GAGGCAGCGGTTCATCGATC
TCTTCCTGAATTTGGCTGTGGAAGAACACAAAGCAAGAATCGG
TCGATAAACCTCTGC
ATCCA
GCGCTCACTTTGCCTCTCT
dot-bracket secondary structure
...(((.((((((((((..(((
((.((((.((((.(((((((
..(((.((..((((...((......)).)))).)).)))..))
))))).)))).))))
.))))
).....)))))))))))))
SIMILARITIES
miRBase
vvi-MIR162
:
1e-22
PMRD
vvi-miR162
:
1e-22
microPC
miR162
:
4e-44
UniProt
no hits
RFAM
MIR162_2: 8e-18
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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