miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Vitis shuttleworthii, Vitis vinifera



ABOUT THIS RECORD

ID: MNEST002823
species: Vitis shuttleworthii
miRNA family: miR399h
source: miRNEST

Taxonomy by NCBI:
Vitis shuttleworthii Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGCCGTTCTCCTCTGGCACT

miRNA*
TGTCGGAGGCGAACGAGAGCG

mismatches: 3
bulges: 0

View larger
pre-miRNA
CTCGGTGGTGTCGGAGGCGAACGAGAGCGAACTTCCGGAGGTTTCGATCAACTCCGACGACCCAGTGGCGCTGCCGTTCTCCTCTGGCACTACCGG

dot-bracket secondary structure
.((((((((((((((((.(((((..((((.((((((((((...........)))))..))...)))..))))..))))).))))))))))))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|P31687|4CL2_SOYBN: 0.000004

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;