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Species belonging to selected taxon:

Vitis shuttleworthii, Vitis vinifera



ABOUT THIS RECORD

ID: MNEST008319
species: Vitis vinifera
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGATCATGTGGCAGTTTCACC

miRNA*
TGAAGCTGCCAGCATGATCTAA

mismatches: 1
bulges: 1

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pre-miRNA
TCTTCTTCTAATGGGTGCACCACTATCAGTTGAAGCTGCCAGCATGATCTAAACTTGCTTCCCTTTGTGAACAGAGATCAGATCATGTGGCAGTTTCACC
TGTTGTTGGTAGCACAAGAAACCCTAA


dot-bracket secondary structure
.....((((.....((((((((.((.(((.(((((((((((.((((((((...(((..(((.......)))..)))...))))))))))))))))))).)
)).)).)))).)))).)))).......



SIMILARITIES
miRBase vvi-MIR167e: 7e-46

PMRD vvi-miR167e: 7e-46

microPC miR167: 0.000000000007
UniProt no hits

RFAM MIR167_1: 2e-46
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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