miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Vitis shuttleworthii, Vitis vinifera



ABOUT THIS RECORD

ID: MNEST008316
species: Vitis vinifera
miRNA family: MIR1171
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGTGGAGTGGAATGGAAT

miRNA*
TCCATTCCCACATTTCAAC

mismatches: 4
bulges: 2

View larger
pre-miRNA
TTCAAGAAAAGTGGAGTGGAGTGGAATGGAATTGGGGGTTGCCAGGGTTCCATCTGCAATGGAAAGACCTTAAAAAGATTTTCTTTTGCGAAACAAATTT
TGAAAATATTTTTTGCGTACATTATCCATTCCCACATTTCAACGGATTGGC


dot-bracket secondary structure
.((((......(((((((....((((((((..((.....(((.(((.((((((.....))))))...))).(((((.((((((.((((.....))))...
.)))))).))))).)))..))...))))))))..))))))).....)))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;