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Species belonging to selected taxon:
Vitis shuttleworthii
,
Vitis vinifera
ABOUT THIS RECORD
ID:
MNEST008334
species:
Vitis vinifera
miRNA family:
MIRf519
source:
miRNEST
Taxonomy by NCBI:
Vitis vinifera
Vitis
Vitaceae
Vitales
rosids incertae sedis
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCATAGCATCATGAGCAATCA
miRNA*
ACTGCTCATGATATTATCTCAT
mismatches:
3
bulges:
1
View larger
pre-miRNA
AAATATAGCACACTGGCTTCCTGTCTAGAAT
GCATAGCATCATGAGCAATCA
CCCTTAGAAATTAGCAGAGTG
ACTGCTCATGATATTATCTCAT
TCCAT
GAAAGCTTGAGCATGCTACACAG
dot-bracket secondary structure
.....(((((.....((((.((.((..((((
(.((((.((((((((((.(((
(.((...........)).)))
).)))))))))).))))..)))
))...
)).))...)))).))))).....
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf11142-akr
:
0.00009
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record