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Species belonging to selected taxon:
Xenopus laevis
ABOUT THIS RECORD
ID:
MNEST025666
species:
Xenopus laevis
miRNA family:
mir-142
source:
miRBase, original name:
xla-mir-142
(
MI0008377
)
Taxonomy by NCBI:
Xenopus laevis
Xenopus
Xenopus
Xenopodinae
Pipidae
Pipoidea
Mesobatrachia
Anura
Batrachia
Amphibia
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATAAAGTAGAAAGCACTAC
miRNA*
AGTGTTTCCTACTTTATGGA
mismatches:
1
bulges:
0
View larger
pre-miRNA
CAGTGCAGCCACC
CATAAAGTAGAAAGCACTAC
TAGACAGGACTGAACGCTGT
AGTGTTTCCTACTTTATGGA
TGAGTGTACTGGG
dot-bracket secondary structure
(((((((..((.(
((((((((((.(((((((((
.((...(.......).))))
))))))).))))))))))).
))..)))))))..
SIMILARITIES
miRBase
xtr-mir-142-1
:
1e-43
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-142: 6e-27
Identical with:
xtr-mir-142-1
from miRBase (
MNEST025789
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Biasci D, Giudetti G, Barsacchi G, Andreazzoli M,
Unpublished (2008).
,