miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Xenopus laevis, Xenopus laevis



ABOUT THIS RECORD

ID: MNEST006588
species: Xenopus laevis
miRNA family: miR-1369
source: miRNEST

Taxonomy by NCBI:
Xenopus laevis Xenopus Xenopus Xenopodinae Pipidae Pipoidea Mesobatrachia Anura Batrachia Amphibia Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGTGTGAGGAGGGAGAGGGGA

miRNA*
CCCCTCCCTTATCCACACTGT

mismatches: 3
bulges: 2

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pre-miRNA
TGGCTGCCATTTCCCCCCTCCCTTATCCACACTGTGCATTAGTGAAAAAGGCACCCCTGTAAAAAACTTTACCCTAAAATGCAGAGAAGTGCAGCAGAGT
TCCCTAGCACCATCTACCTGTTTGACTAATGCACAGTGTGAGGAGGGAGAGGGGAGAAATGGGAGG


dot-bracket secondary structure
...((.((((((((((((((((((...((((((((((((((((.(((.(((((.....(((((....))))).......)))..(((.((((........
......))))..)))..)).))).))))))))))))))))..))))))).)))).))))))).)).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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