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Species belonging to selected taxon:

Zea mays



ABOUT THIS RECORD

ID: MNEST003594
species: Zea mays
miRNA family: MIRf209
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACAGGTCCGAGCCCTGGGTTT

miRNA*
ATCAAAGGGTATGCGGCCTGGTG

mismatches: 3
bulges: 2

View larger
pre-miRNA
CCAAAGCATTAAATCAAAGGGTATGCGGCCTGGTGTATCATTGAGGCCAGGTACTCCAGTGGAGGAAGTTTTTCCCCCTGGTGGAAAGCAGAAAATCCCG
GGTAGAATTGGTTTCTTGGTGATTGACAGGTCCGAGCCCTGGGTTTTTTGGGTGG


dot-bracket secondary structure
(((...((..(((((..(((((.((.((((((...(((((..((((((((.((((((((.((.((((....)))))))))).(((..........)))..
))))...)))))))).))))).....)))))))).))))).)))))..))..)))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9SE42|RPE1_ORYSJ: 0.0000005

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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