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Species belonging to selected taxon:
Zea mays
ABOUT THIS RECORD
ID:
MNEST003615
species:
Zea mays
miRNA family:
MIRf380
source:
miRNEST
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCATCATCGGCGTCATCGTCG
miRNA*
GTGGTGATCACGATGGTGGTG
mismatches:
2
bulges:
0
View larger
pre-miRNA
GCCATGGTTCG
CCATCATCGGCGTCATCGTCG
CCCCCATCCTCGTGATGATCCCGATGATCATTTACCGGAAGCGGCACCCGGTGAACCTCGCGCTCCTG
GCGCTCTTCACCGTCTGCATCAGCTTCGCCGGGGGGCTGAGCTGCCTGACGGCGAACGGGCCAGTGATACTGGAGGCG
GTGGTGATCACGATGGTGGTG
G
TGCTGGG
dot-bracket secondary structure
.(((....(((
(((((((((..((((((((((
(((((.(((....(((((((.....)))))))....)))(((.(((..(((((((....(((((...)
))))..)))))))..)))....)))((((((..((((......))))..))))))..)))(((((...))))).))))
))))))))..)))))))))))
)
...))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q94A20|BI1L_ARATH: 0.0000000002
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record