miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Barnadesia spinosa
,
Cichorium intybus
,
Gerbera hybrid cultivar
,
Guizotia abyssinica
,
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Lactuca perennis
,
Lactuca saligna
,
Lactuca sativa
,
Lactuca serriola
,
Lactuca virosa
,
Panax ginseng
,
Parthenium argentatum
,
Taraxacum kok-saghyz
,
Taraxacum officinale
,
Zinnia violacea
,
Carthamus tinctorius
,
Centaurea maculosa
,
Centaurea solstitialis
,
Cichorium endivia
,
Artemisia annua
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST002960
species:
Centaurea solstitialis
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Centaurea solstitialis
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCTTCATCATCATCTTCC
miRNA*
ACGATGATGATGAAGATGAAG
mismatches:
2
bulges:
0
View larger
pre-miRNA
CTTCAAGTTCT
TCATCTTCATCATCATCTTCC
ATTGTTACCACTTCAAGAATATCATGTTTCAATGCGTGTAAACCAAAACCGATCAGTATTACCCCTTC
CAAAGCTCGATTATTTCGCCACGAACGAACAACTCCAACCCCAACTGTGATTGCTTCAGGTGAACAACTGAAAACTGAGGAATTGAGTAAAG
ACGATGAT
GATGAAGATGAAG
ACGGTCCG
dot-bracket secondary structure
........(((
(((((((((((((((((.((.
....((((((.(((.......(((..(((((.((.((....)))).....(((((((.((........
.)).))).))))..((((((..((((((.((................)).))).))).))))))....)))))..))).))).)).)))).)
).))))))
)))))))))))))
).......
SIMILARITIES
miRBase
ath-MIR414
:
0.0002
PMRD
ath-miR414
:
0.0002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record