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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Panax ginseng, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002982
species: Cichorium endivia
miRNA family: MIR171
source: miRNEST

Taxonomy by NCBI:
Cichorium endivia Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATTGAGCCGTGCCAATATC

miRNA*
 TATTGAGCGGCTCATTCTAA

mismatches: 3
bulges: 1
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pre-miRNA
 AGAAATGGAGAGATATTGAGCGGCTCATTCTAAAACAAAGTTAACCATTAGTTATCTTCGTGGTTCTGATTGAGCCGTGCCAATATCTCTCCTTTGG

dot-bracket secondary structure
......((((((((((((.((((((((.((.((.((.(((.((((.....)))).))).))..))..)).))))))))..)))))))))))).....


SIMILARITIES
miRBase hvu-MIR171: 0.00000002

PMRD zma-miR171d: 0.00000007

microPC miR171: 0.00000007		UniProt no hits

RFAM MIR171_1: 0.000001		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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