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Species belonging to selected taxon:
Barnadesia spinosa
,
Cichorium intybus
,
Gerbera hybrid cultivar
,
Guizotia abyssinica
,
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Lactuca perennis
,
Lactuca saligna
,
Lactuca sativa
,
Lactuca serriola
,
Lactuca virosa
,
Panax ginseng
,
Parthenium argentatum
,
Taraxacum kok-saghyz
,
Taraxacum officinale
,
Zinnia violacea
,
Carthamus tinctorius
,
Centaurea maculosa
,
Centaurea solstitialis
,
Cichorium endivia
,
Artemisia annua
,
Helianthus annuus
ABOUT THIS RECORD
ID:
MNEST000864
species:
Helianthus paradoxus
miRNA family:
MIRf582
source:
miRNEST
Taxonomy by NCBI:
Helianthus paradoxus
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTGCTGTTGTTGCAGTAGGA
miRNA*
TTCCTGGATGACATTACTG
mismatches:
2
bulges:
2
View larger
pre-miRNA
TAAATGTCCCA
GCTGCTGTTGTTGCAGTAGGA
TTATTCTTC
TTCCTGGATGACATTACTG
GGTTTGAA
dot-bracket secondary structure
.....(.((((
(.((.(((((((.(((.((((
.......))
)).)))))))))).)))))
))..)...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q8GYC7|PGL1B_ARATH: 0.0002
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record