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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003823
species: Oryza sativa
miRNA family: MIR446
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CATCAATATGAATGTGGGAGA

miRNA*
 TCCCACATTCATATTGAAGTT

mismatches: 1
bulges: 0
View larger
pre-miRNA
 AACTGTACTCCCTCCATTTCACAATTTAAGTCATTCTAGCATTTCCCACATTCATATTGAAGTTGAGGAATGTANACATATATATCTATCTAGATTCATT
AACATCAATATGAATGTGGGAGATGCTAAAATGACTTACATTGTGGAATGGAGGAAGTATGTA

dot-bracket secondary structure
....(((((.(((((((((((((((.(((((((((.((((((((((((((((((((((((.(((((.((((......................)))).))
))).)))))))))))))))))))))))).))))))))).))))))))))))))).)))))...


SIMILARITIES
miRBase osa-MIR808: 2e-52

PMRD osa-miR808: 2e-52

microPC miR809: 2e-21		UniProt no hits

RFAM MIR1122: 2e-50		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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