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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST042128
species: Oryza sativa
miRNA family: MIR441
source: miRBase, original name: osa-MIR809g (MI0005227)

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAATGTGAGAAATGTTAGAAT

miRNA*
 TTTAGCATTTCCCATATTCATA

mismatches: 1
bulges: 0
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pre-miRNA
 ACTTCCTCCGTTTCACAATGTAAGTCATTTTAGCATTTCCCATATTCATATTGATGCTAATGAATATATATAAATATATATGTCTAGATTCATTAGCATC
AATATGAATGTGAGAAATGTTAGAATGACTTACATTGTGAAACGGAGGGAGT

dot-bracket secondary structure
(((((((((((((((((((((((((((((((((((((((.((((((((((((((((((((((((((((((((....)))))))....)))))))))))))
)))))))))))).)))))))))))))))))))))))))))))))))))))))


SIMILARITIES
miRBase osa-MIR809d: 7e-34

PMRD osa-miR809g: 1e-50

microPC miR809: 0.00000000000003		UniProt no hits

RFAM MIR1122: 1e-32

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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern

references
[1] Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"



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