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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST002449
species: Saccharum hybrid cultivar CoS 767
miRNA family: MIR437
source: miRNEST

Taxonomy by NCBI:
Saccharum hybrid cultivar CoS 767 Saccharum hybrid cultivar Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAAGTTAGAGAAGTTTGACAT

miRNA*
 GTCAAAACTTTTCTAACTTTGA

mismatches: 2
bulges: 1
View larger
pre-miRNA
 TAAGAAACAGCCAATGATACTCCTCCTTTTCTAAAATGCAGGGCGTTTTACTTTTGTCCTAAGTCAAAACTTTTCTAACTTTGAACAATTTTATAGAAAA
ATATATTGACATCTACAATACCAAATAAGCGCACTGTCAAGACATTTCATGGTGGATTTAATGAAGCTAATTTGATGTTTCAGATGTCTGTGCAATGTTC
TATACACAGTGAAGTTAGAGAAGTTTGACATCGGGCAAAAATAAAATGACATACATTTTTGAATGGTTGGGGTAGTATACAATGGACTAC

dot-bracket secondary structure
........(((((.((.((((((.((..(((.((((((.....(((((((.((((((((...((((((.((((((((((((((........(((((((..
...(((.(((((((..((((.(((((.(((.((...(((...(((...))).)))......))..))).))))).))))..))))))).))).....)))
)))).....))))))))))))))))))))...)))))))).))))))).....)))))).))).))..)))))).....)).))).))..


SIMILARITIES
miRBase sbi-MIR437f: 5e-21

PMRD sbi-miR437f: 5e-21

microPC miR437: 0.00000002		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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