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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003643
species: Zea mays
miRNA family: MIRf789
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCAGTTCAATAAAGCTGTGG

miRNA*
 ACAGCTTTCTTGAACTGCATC

mismatches: 1
bulges: 0
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pre-miRNA
 CAGTAATCAGATGGCCTTCTTTGTGATCTTCCACAGCTTTCTTGAACTGCATCTCTCAGAGGAGCGGCAGCTTCAACTCCTCCACCCGCATCAGCAGGTG
CATGCAGTTCAATAAAGCTGTGGGAAACTGCAGAGAGAGGCCAGCACCAGCA

dot-bracket secondary structure
...........((((((((((((((...((((((((((((.(((((((((((......((((((............))))))((((.((....)).))))
.))))))))))).))))))))))))...)))))))).))))))((....)).


SIMILARITIES
miRBase zma-MIR396b: 3e-73

PMRD zma-miR396b: 3e-73

microPC miR396: 0.000000000008		UniProt no hits

RFAM MIR396: 5e-26		most similar mature miRNAs

Identical with: zma-MIR396h from miRBase (MNEST042814)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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