miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Arachis duranensis
,
Arachis hypogaea
,
Arachis ipaensis
,
Cucumis melo subsp. melo
,
Euonymus alatus
,
Euphorbia esula
,
Fagus sylvatica
,
Fragaria vesca
,
Fragaria x ananassa
,
Glycine soja
,
Glycyrrhiza uralensis
,
Hevea brasiliensis
,
Humulus lupulus
,
Jatropha curcas
,
Juglans hindsii x Juglans regia
,
Linum usitatissimum
,
Lotus japonicus
,
Manihot esculenta
,
Medicago sativa
,
Phaseolus acutifolius
,
Phaseolus coccineus
,
Pisum sativum
,
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Prunus armeniaca
,
Prunus persica
,
Quercus petraea
,
Quercus robur
,
Trifolium pratense
,
Bruguiera gymnorhiza
,
Cajanus cajan
,
Cicer arietinum
,
Glycine max
,
Vigna unguiculata
,
Medicago truncatula
,
Populus trichocarpa
,
Phaseolus vulgaris
,
Ricinus communis
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST045090
species:
Fragaria vesca
miRNA family:
MIR408
source:
microPC, original name:
miR408
Taxonomy by NCBI:
Fragaria vesca
Fragaria
Potentilleae
Rosodae
Rosoideae
Rosaceae
Rosales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGCACTGCCTCTTCCCTGGC
miRNA*
CAGGGACGAGGTAGAGCATGG
mismatches:
4
bulges:
0
View larger
pre-miRNA
GA
CAGGGACGAGGTAGAGCATGG
ATGGAGTTCCCAACAGAACAGTCAAGCTGTTGTGGCTCCACTC
ATGCACTGCCTCTTCCCTGGC
dot-bracket secondary structure
..
((((((.(((((((.(((((.
.(((((((..((((((..........)))))).)))))))..)
)))).))))))).))))))..
SIMILARITIES
miRBase
vvi-MIR408
:
0.00000007
PMRD
ppe-miR408
:
1e-27
microPC
miR408
:
3e-44
UniProt
no hits
RFAM
MIR408: 0.00000000000008
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record