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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST048417
species: Capsicum annuum
source: PMRD, original name: can-miR156b

Taxonomy by NCBI:
Capsicum annuum Capsicum Capsiceae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGGGAGCAC

miRNA*
 GTTTCCTTGAACCATCCAA

mismatches: 9
bulges: 1
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pre-miRNA
 ATGGTTTCCTTGAACCATCCAAGGCAGAGTTGATGAAATGCCTGTTGACAGAAGAGAGGGAGCAC

dot-bracket secondary structure
...((((((((......((..(((((............)))))...)).......))))))))..


SIMILARITIES
miRBase vvi-MIR156a: 0.000003

PMRD vvi-miR156a: 0.000003

microPC miR156: 0.0002		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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