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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST002658
species: Solanum melongena
miRNA family: MIRf751
source: miRNEST

Taxonomy by NCBI:
Solanum melongena Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GATCCCTTTGGATGCCTCCTT

miRNA*
 GGAGGAGTCCAAAGGGATAGC

mismatches: 2
bulges: 0
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pre-miRNA
 GTAGCTCCAAAAGGAGGAGTCCAAAGGGATAGCATGATCCAATTCAATATTTTTTTTATGTAATAGATTATATGTTGTTTGGATACTTCAAAATTATGCA
CAATACGTGTTGAATCCTTCAAAAGAATAGTATATTTTTAAAAGATCTAATCGATACAGGCCTGACAACATTTTGGAGAGTTCAAGCAACATAATAAATA
GAAAGTTATATTACTTGAACTCTCACAAAAAAAAATATTATTGTATCCATGTTAAACCTTCCAAAAATACAATATCTTGAAGAATTTAACATGTACCTGT
CGATATTCTTGAAAAATCTGAACAACGTATATAGAGATTGGATCAATGCGATCCCTTTGGATGCCTCCTTAAGTTGCTT

dot-bracket secondary structure
((((((....(((((((.((((((((((((.(((((((((((((........................((((((((((((((((..((((((((..((.(
((.((((((((((((.(((((..(((((.((((.(((............((.(((((((...........((((((((((((((((.((.(((((.....
....))))).)).))))))))))).)))))..........))))))).))............))).)))).)).)))))))).))))))))))))..)))
))..))).)))))..))))))))))))))))....))))))))).)))).)))))))))))).))))))).))))))..


SIMILARITIES
miRBase mtr-MIR393: 0.000000000005

PMRD mtr-miR393: 0.000000000005

microPC miR393: 0.00002		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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