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Species belonging to selected taxon:

Persea americana, Aristolochia fimbriata, Liriodendron tulipifera, Saruma henryi



ABOUT THIS RECORD

ID: MNEST000162
species: Aristolochia fimbriata
miRNA family: miR160d
source: miRNEST

Taxonomy by NCBI:
Aristolochia fimbriata Aristolochia Aristolochiaceae Piperales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCGTGCGAGGAGCCAAGCATA

miRNA*
TGCCTGGCTCCCTGTATGCCA

mismatches: 2
bulges: 0

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pre-miRNA
AAAAGGGCTGTGCCTGGCTCCCTGTATGCCACACGTAGAGACCCATCTGTTTATGATCGGCTACTGCGGGTGGCGTGCGAGGAGCCAAGCATACCTCCTC


dot-bracket secondary structure
....(((.(((((.(((((((.((((((((((.(((((((.((.(((.......))).)))).))))).)))))))))).))))))).))))))))....



SIMILARITIES
miRBase vvi-MIR160c: 0.000000000000001

PMRD vvi-miR160c: 0.000000000000001

microPC miR160: 1e-40
UniProt no hits

RFAM mir-160: 0.00000000000009
most similar mature miRNAs

Identical with: miR160 from microPC (MNEST046232)

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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