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Species belonging to selected taxon:

Brassica napus, Brassica oleracea var. alboglabra, Brassica rapa, Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Eucalyptus globulus, Eucalyptus gunnii, Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Limnanthes alba, Paullinia cupana var. sorbilis, Raphanus raphanistrum, Raphanus raphanistrum subsp. landra, Raphanus raphanistrum subsp. maritimus, Raphanus sativus, Raphanus sativus var. oleiformis, Thellungiella halophila, Theobroma cacao, Tropaeolum majus, Carica papaya, Citrus clementina, Arabidopsis thaliana, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST046339
species: Carica papaya
source: microPC, original name: miR390

Taxonomy by NCBI:
Carica papaya Carica Caricaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGCTCAGGAGGGATAGC

miRNA*
 TATCCATCCTGAGTTT

mismatches: 1
bulges: 0
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pre-miRNA
 AAGCTCAGGAGGGATAGCGCCATGGCGGGTCTTGAATCTTGATCTTCATTTGCGCTATCCATCCTGAGTTT

dot-bracket secondary structure
((((((((((.(((((((((.((((.(((((.........)))))))))..))))))))).))))))))))


SIMILARITIES
miRBase gma-MIR390a: 0.000000003

PMRD ath-miR390b: 0.00000005

microPC miR390: 7e-35		UniProt no hits

RFAM MIR390: 1e-33

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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