Parental gene:

DCAF8, ENSBTAG00000005796

Aliases:DCAF8, H326, WDR42A
Description:DDB1- and CUL4-associated factor 8 [Source:RefSeq peptide;Acc:NP_001193348]
Organism:Cow (Bos taurus)
Coordinates:3:9538549..9576282(+)


>ENSBTAG00000005796
ATGTCCAGCAAAGGGAGCAGCACAGATGGCAGAACAGACTTAGCTAATGGAAGCCTGTCTAGCAGTCCAGAGGAGATGTC
TGGTGCTGAGGAGGGGAGGGAGACATCCTCAGGCATTGAAGTGGAGGCTTCAGACCTGAGCTTGAGCTTGACCGGGGACG
ATGGTGGCCCCAACCGCACCAGCACAGAGAGTCGAGGCACAGATACAGAGAGCTCAGGTGAAGACAAGGACTCTGACAGC
ATGGAGGACACCGGCCATTACTCGGTCAATGACGAGAGCCAAGTCCATGACCGCTCGGAGGAGGAGGAGGAGGAGGAGCA
TCCTCGTCGTCGTGTGCAGCGCAAGCGGGCCAATCGTGACCAGGACTCATCAGACGATGAGCGGGCCCTGGAAGACTGGG
TGTCCTCAGAGACATCAGCCCTGCCCCGACCTCGCTGGCAAGCCCTTCCTGCCCTTCGGGAGCGGGAGCTGGGCTCAAGT
GCCCGCTTTGTGTATGAGGCTTGTGGGGCAAGAGTCTTTGTGCAGCGTTTCCGCCTGCAGCATGGGCTTGAAGGCCATAC
TGGCTGTGTCAATACTCTGCACTTTAACCAACGCGGCACCTGGCTGGCCAGTGGCAGCGATGACCTGAAAGTGGTGGTTT
GGGACTGGGTGCGGCGGCAGCCAGTATTGGACTTTGAGAGCGGCCACAAGAGCAATGTCTTCCAGGCCAAGTTCCTTCCT
AACAGTGGTGATTCCACCCTGGCCATGTGTGCCCGTGATGGACAGGTTCGGGTAGCAGAGCTGTCTGCTACACAGTGCTG
CAAGAACACAAAGCGTGTGGCCCAGCACAAGGGAGCATCCCACAAGCTAGCCCTGGAACCAGATTCTCCCTGTACGTTCC
TGTCTGCCGGTGAAGATGCAGTTGTCTTCACCATTGACCTCAGACAAGACCGACCAGCTTCGAAACTGGTGGTGACAAAA
GAAAAGGAGAAGAAGGTGGGGCTGTATACAATCTATGTGAATCCTGCCAACACCCACCAGTTTGCAGTGGGTGGACGAGA
CCAGTTTGTAAGGATTTATGACCAGAGGAAGATTGATGAGAATGAAAACAATGGAGTACTCAAGAAATTCTGCCCTCATC
ACCTGGTGAACAGTGAGTCCAAAGCAAACATCACCTGTCTTGTGTACAGCCACGACGGCACAGAGCTCCTGGCCAGTTAC
AATGATGAAGACATTTACCTCTTCAACTCCTCTCACAGTGATGGGGCCCAGTATATTAAGAGATATAAGGGCCACAGAAA
TAATGCCACAGTAAAAGGCGTCAATTTCTATGGCCCCAAGAGTGAGTTTGTGGTGAGCGGTAGTGACTGTGGGCACATCT
TCCTCTGGGAGAAATCATCCTGCCAGATCATTCAGTTCATGGAGGGGGACAAGGGAGGCGTGGTAAACTGTCTTGAGCCC
CACCCTCACCTGCCTGTGCTGGCAACCAGTGGCCTAGACCATGATGTCAAAATCTGGGCGCCCACAGCTGAAACTTCCAC
TGAACTTACAGGGTTAAAGGATGTGATTAAGAAGAACAAGCGGGAACGGGATGAAGATAGCTTGCACCACACTGACCTGT
TTGATAGCCACATGCTCTGGTTCCTCATGCACCACCTGAGACAGAGGCGCCATCACCGGCGCTGGCGAGAACCTGGGGTT
GGGGCCACAGACGCCGACTCTGATGAGTCTCCCAGCTCCTCAGACACATCGGACGAGGAGGAGGGTCCTGACCGGGTGCA
GTGCATGCCATCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 76 .42 RPM
SRP017611_kidney 93 .06 RPM
SRP017611_liver 35 .34 RPM
ERP005899_muscle 29 .72 RPM
ERP005899_liver 12 .26 RPM
SRP030211_testis 55 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014293 ortholog_one2one 1 retrogene
retro_amel_47,
Canis familiaris ENSCAFG00000031010 ortholog_one2one 1 retrogene
retro_cfam_223,
Callithrix jacchus ENSCJAG00000005913 ortholog_one2one 1 retrogene
retro_cjac_1322,
Echinops telfairi ENSETEG00000012876 ortholog_one2one 1 retrogene
retro_etel_654,
Felis catus ENSFCAG00000003925 ortholog_one2one 1 retrogene
retro_fcat_14,
Mustela putorius furo ENSMPUG00000013949 ortholog_one2one 1 retrogene
retro_mputfur_173,
Mus musculus ENSMUSG00000026554 possible_ortholog 1 retrogene
retro_mmus_111,
Otolemur garnettii ENSOGAG00000011349 ortholog_one2one 1 retrogene
retro_ogar_2113,
Pteropus vampyrus ENSPVAG00000007982 ortholog_one2one 1 retrogene
retro_pvam_1356,
Sus scrofa ENSSSCG00000006388 ortholog_one2one 1 retrogene
retro_sscr_88,
Tupaia belangeri ENSTBEG00000001566 ortholog_one2one 1 retrogene
retro_tbel_3644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1853 66.53 85.45
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Download FASTA sequences of all ENSBTAG00000005796 retrocopies