Parental gene: | RAC1, ENSBTAG00000009233 |
| Aliases: | None |
| Description: | Ras-related C3 botulinum toxin substrate 1 [Source:UniProtKB/Swiss-Prot;Acc:P62998] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 25:38832484..38841319(+) |
>ENSBTAG00000009233
GCTGTGGGTAAGACTTGCCTCCTGATCAGTTACACTACCAATGCGTTTCCTGGAGAATATATCCCCACTGTCTTTGACAA
CTACTCTGCCAATGTCATGGTGGATGGAAAACCCGTGAATCTGGGCTTGTGGGACACAGCCGGACAAGAAGATTATGACC
GATTACGCCCCCTGTCCTACCCGCAGACAGATGTATTCTTAATTTGCTTTTCTCTCGTGAGTCCTGCATCATTTGAAAAT
GTTCGTGCAAAGTGGTACCCTGAAGTGCGACACCATTGTCCCAACACACCCATCATCCTGGTGGGGACGAAACTTGACCT
GAGGGACGATAAAGACACGATCGAGAAGCTGAAGGAGAAGAAGCTGACGCCCATCACCTACCCGCAGGGCTTGGCCATGG
CCAAGGAGATCGGTGCCGTCAAATACCTGGAGTGCTCGGCGCTCACGCAGCGGGGCCTCAAGACAGTGTTTGATGAGGCG
ATCCGGGCTGTTCTCTGCCCACCCCCCGTCAAGAAGCGGAAGAGGAAGTGCCTGCTCTTGTGA
GCTGTGGGTAAGACTTGCCTCCTGATCAGTTACACTACCAATGCGTTTCCTGGAGAATATATCCCCACTGTCTTTGACAA
CTACTCTGCCAATGTCATGGTGGATGGAAAACCCGTGAATCTGGGCTTGTGGGACACAGCCGGACAAGAAGATTATGACC
GATTACGCCCCCTGTCCTACCCGCAGACAGATGTATTCTTAATTTGCTTTTCTCTCGTGAGTCCTGCATCATTTGAAAAT
GTTCGTGCAAAGTGGTACCCTGAAGTGCGACACCATTGTCCCAACACACCCATCATCCTGGTGGGGACGAAACTTGACCT
GAGGGACGATAAAGACACGATCGAGAAGCTGAAGGAGAAGAAGCTGACGCCCATCACCTACCCGCAGGGCTTGGCCATGG
CCAAGGAGATCGGTGCCGTCAAATACCTGGAGTGCTCGGCGCTCACGCAGCGGGGCCTCAAGACAGTGTTTGATGAGGCG
ATCCGGGCTGTTCTCTGCCCACCCCCCGTCAAGAAGCGGAAGAGGAAGTGCCTGCTCTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 102 .09 RPM |
| SRP017611_kidney | 107 .58 RPM |
| SRP017611_liver | 33 .98 RPM |
| ERP005899_muscle | 201 .65 RPM |
| ERP005899_liver | 26 .10 RPM |
| SRP030211_testis | 42 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015716 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026733 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021075 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009956 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018910 | possible_ortholog | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000007272 | possible_ortholog | 4 retrogenes | |
| Xenopus tropicalis | ENSXETG00000027593 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_332 | 62.81 | 67.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1601 | 57.26 | 63.89 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000009233 retrocopies