Parental gene: | MMU.4339, ENSMMUG00000021075 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 3:44599081..44618096(+) |
>ENSMMUG00000021075
GCTGTAGGTAAAACTTGCCTACTGATCAGTTACACAACCAATGCATTTCCTGGAGAATATATCCCTACTGTCTTTGACAA
TTACTCTGCCAATGTTATGGTAGATGGAAAACCGGTGAATCTGGGCTTATGGGATACAGCTGGACAAGAAGATTATGACA
GATTACGCCCCCTATCCTATCCGCAAACAGTTGGAGAAACGTACGGTAAGGATATAACCTCCCGGGGCAAAGACAAGCCG
ATTGCCGATGTGTTCTTAATTTGCTTTTCCCTTGTGAGTCCTGCATCATTTGAAAATGTCCGTGCAAAGTGGTATCCTGA
GGTGCGGCACCACTGTCCCAACACTCCCATCATCCTAGTGGGAACTAAACTTGATCTTAGGGATGATAAAGACACGATCG
AGAAACTGAAGGAGAAGAAGCTGACTCCCATCACCTATCCACAGGGTCTAGCCATGGCTAAGGAGATTGGTGCTGTGAAA
TACCTGGAGTGCTCGGCGCTCACACAGCGAGGCCTCAAGACAGTGTTTGACGAAGCGATCCGAGCAGTCCTCTGCCCACC
TCCCGTGAAGAAGAGGAAGAGAAAATGCCTGCTGTTGTAA
GCTGTAGGTAAAACTTGCCTACTGATCAGTTACACAACCAATGCATTTCCTGGAGAATATATCCCTACTGTCTTTGACAA
TTACTCTGCCAATGTTATGGTAGATGGAAAACCGGTGAATCTGGGCTTATGGGATACAGCTGGACAAGAAGATTATGACA
GATTACGCCCCCTATCCTATCCGCAAACAGTTGGAGAAACGTACGGTAAGGATATAACCTCCCGGGGCAAAGACAAGCCG
ATTGCCGATGTGTTCTTAATTTGCTTTTCCCTTGTGAGTCCTGCATCATTTGAAAATGTCCGTGCAAAGTGGTATCCTGA
GGTGCGGCACCACTGTCCCAACACTCCCATCATCCTAGTGGGAACTAAACTTGATCTTAGGGATGATAAAGACACGATCG
AGAAACTGAAGGAGAAGAAGCTGACTCCCATCACCTATCCACAGGGTCTAGCCATGGCTAAGGAGATTGGTGCTGTGAAA
TACCTGGAGTGCTCGGCGCTCACACAGCGAGGCCTCAAGACAGTGTTTGACGAAGCGATCCGAGCAGTCCTCTGCCCACC
TCCCGTGAAGAAGAGGAAGAGAAAATGCCTGCTGTTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 187 .62 RPM |
| SRP007412_brain | 250 .10 RPM |
| SRP007412_cerebellum | 177 .26 RPM |
| SRP007412_heart | 88 .62 RPM |
| SRP007412_kidney | 125 .94 RPM |
| SRP007412_liver | 73 .03 RPM |
| SRP007412_testis | 39 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009233 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000015716 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026733 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000018854 | within_species_paralog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000022009 | other_paralog | 8 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009956 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018910 | possible_ortholog | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000007272 | possible_ortholog | 4 retrogenes | |
| Xenopus tropicalis | ENSXETG00000027593 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_721 | 57.58 | 53.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1310 | 73.91 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_1964 | 82.87 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_2642 | 91.67 | 99.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000021075 retrocopies