Parental gene:

RAC1, ENSCAFG00000015716

Aliases:None
Description:ras-related C3 botulinum toxin substrate 1 precursor [Source:RefSeq peptide;Acc:NP_001003274]
Organism:Dog (Canis familiaris)
Coordinates:6:11724636..11757069(+)


>ENSCAFG00000015716
ATGCAGGCCATCAAGTGTGTGGTGGTGGAAGACGGAGCTGTAGGTAAAACTTGTCTACTGATCAGTTACACAACCAATGC
ATTTCCTGGAGAATACATCCCCACTGTCTTTGACAATTACTCTGCCAATGTTATGGTAGATGGAAAACCAGTGAATCTGG
GCTTATGGGATACAGCTGGACAAGAAGATTATGACAGATTACGTCCCTTATCCTATCCGCAAACAGTTGGAGAAACGTAT
GGTAAGGATATACCCTCCAGGGGCAAAGACAAGCTGATTGCCGATGTATTCTTAATTTGCTTTTCTCTTGTGAGTCCTGC
ATCATTTGAAAATGTTCGAGCAAAGTGGTACCCTGAAGTGCGACACCACTGTCCCAACACCCCTATCATCTTGGTGGGGA
CTAAACTTGATCTCAGGGACGACAAAGACACGATTGAGAAACTGAAGGAGAAGAAGCTGACTCCCATCACCTACCCACAG
GGTCTGGCCATGGCTAAGGAGATCGGTGCTGTAAAATACCTGGAGTGCTCTGCTCTCACGCAGCGAGGCCTCAAGACAGT
GTTTGATGAAGCTATTCGAGCGGTTCTCTGCCCCCCTCCCGTCAAGAAGAGGAAGAGAAAATGCCTGCTGTTG

Library Parental gene expression (RPM)
SRP017611_brain 97 .41 RPM
SRP017611_kidney 47 .02 RPM
SRP017611_liver 28 .79 RPM
SRP012049_cerebellum 90 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009233 ortholog_one2one 2 retrogenes
retro_btau_1601, retro_btau_332,
Canis familiaris ENSCAFG00000014707 other_paralog 5 retrogenes
retro_cfam_1587, retro_cfam_1970, retro_cfam_2189, retro_cfam_88, retro_cfam_89,
Gorilla gorilla ENSGGOG00000026733 possible_ortholog 2 retrogenes
retro_ggor_2110, retro_ggor_217,
Macaca mulatta ENSMMUG00000021075 ortholog_one2one 4 retrogenes
retro_mmul_1310, retro_mmul_1964, retro_mmul_2642, retro_mmul_721,
Oryctolagus cuniculus ENSOCUG00000009956 ortholog_one2one 1 retrogene
retro_ocun_305,
Pan troglodytes ENSPTRG00000018910 possible_ortholog 4 retrogenes
retro_ptro_1288, retro_ptro_3044, retro_ptro_3274, retro_ptro_36,
Tupaia belangeri ENSTBEG00000007272 possible_ortholog 4 retrogenes
retro_tbel_1796, retro_tbel_2564, retro_tbel_4296, retro_tbel_9,
Xenopus tropicalis ENSXETG00000027593 ortholog_one2one 1 retrogene
retro_xtro_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_496 72.73 56.87
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Download FASTA sequences of all ENSCAFG00000015716 retrocopies