Parental gene: | PPP2CB, ENSBTAG00000009245 |
| Aliases: | None |
| Description: | Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q0P594] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 27:26041258..26064654(-) |
>ENSBTAG00000009245
ATGGACGACAAGGCGTTCACTAAGGACCTGGACCAGTGGGTCGAACAGCTGAATGAGTGTAAACAGCTCAACGAGAACCA
AGTCCGGACGCTGTGTGAAAAGGCTAAGGAAATTTTAACAAAAGAATCAAATGTACAAGAGGTCCGTTGTCCTGTCACCG
TCTGTGGAGATGTGCATGGCCAATTCCACGACCTTATGGAACTCTTCAGGATCGGTGGGAAGTCACCAGACACAAACTAT
CTGTTCATGGGCGACTATGTAGACAGAGGTTATTATTCTGTGGAAACGGTAACTCTTCTTGTGGCATTAAAGGTGCGTTA
TCCAGAGCGCATTACAATACTGAGAGGAAACCACGAAAGCCGACAAATTACCCAAGTTTATGGCTTTTATGACGAATGTC
TGCGAAAGTATGGAAATGCCAATGTTTGGAAATATTTTACAGATCTCTTTGATTATCTGCCACTTACAGCTTTAGTAGAT
GGACAGATATTCTGCCTCCATGGTGGCCTCTCTCCATCCATAGATACACTGGATCATATAAGAGCCCTGGATCGTTTACA
AGAAGTTCCACATGAGGGCCCGATGTGTGATCTCTTATGGTCAGATCCAGATGATCGTGGTGGGTGGGGTATTTCACCAC
GTGGTGCTGGCTACACATTTGGACAAGATATTTCTGAAACGTTTAACCATGCTAATGGTCTCACACTGGTTTCTCGTGCT
CACCAACTTGTAATGGAGGGATACAATTGGTGTCACGATCGGAACGTGGTTACCATTTTCAGTGCACCCAATTACTGTTA
TCGTTGTGGGAACCAGGCTGCTATCATGGAATTAGATGACACTTTGAAATATTCCTTCCTTCAGTTTGACCCAGCACCTC
GTCGTGGAGAGCCTCATGTGACCCGGCGCACCCCAGACTACTTCCTGTAA
ATGGACGACAAGGCGTTCACTAAGGACCTGGACCAGTGGGTCGAACAGCTGAATGAGTGTAAACAGCTCAACGAGAACCA
AGTCCGGACGCTGTGTGAAAAGGCTAAGGAAATTTTAACAAAAGAATCAAATGTACAAGAGGTCCGTTGTCCTGTCACCG
TCTGTGGAGATGTGCATGGCCAATTCCACGACCTTATGGAACTCTTCAGGATCGGTGGGAAGTCACCAGACACAAACTAT
CTGTTCATGGGCGACTATGTAGACAGAGGTTATTATTCTGTGGAAACGGTAACTCTTCTTGTGGCATTAAAGGTGCGTTA
TCCAGAGCGCATTACAATACTGAGAGGAAACCACGAAAGCCGACAAATTACCCAAGTTTATGGCTTTTATGACGAATGTC
TGCGAAAGTATGGAAATGCCAATGTTTGGAAATATTTTACAGATCTCTTTGATTATCTGCCACTTACAGCTTTAGTAGAT
GGACAGATATTCTGCCTCCATGGTGGCCTCTCTCCATCCATAGATACACTGGATCATATAAGAGCCCTGGATCGTTTACA
AGAAGTTCCACATGAGGGCCCGATGTGTGATCTCTTATGGTCAGATCCAGATGATCGTGGTGGGTGGGGTATTTCACCAC
GTGGTGCTGGCTACACATTTGGACAAGATATTTCTGAAACGTTTAACCATGCTAATGGTCTCACACTGGTTTCTCGTGCT
CACCAACTTGTAATGGAGGGATACAATTGGTGTCACGATCGGAACGTGGTTACCATTTTCAGTGCACCCAATTACTGTTA
TCGTTGTGGGAACCAGGCTGCTATCATGGAATTAGATGACACTTTGAAATATTCCTTCCTTCAGTTTGACCCAGCACCTC
GTCGTGGAGAGCCTCATGTGACCCGGCGCACCCCAGACTACTTCCTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 52 .99 RPM |
| SRP017611_kidney | 30 .35 RPM |
| SRP017611_liver | 18 .65 RPM |
| ERP005899_muscle | 30 .67 RPM |
| ERP005899_liver | 62 .87 RPM |
| SRP030211_testis | 35 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001615 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000000469 | within_species_paralog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010906 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000018123 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000025139 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019001 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002488 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000000102 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_704 | 99.03 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1199 | 80.75 | 51.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_1750 | 97.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000009245 retrocopies