Parental gene:

SLC25A15, ENSBTAG00000011647

Aliases:None
Description:mitochondrial ornithine transporter 1 [Source:RefSeq peptide;Acc:NP_001039791]
Organism:Cow (Bos taurus)
Coordinates:12:21800780..21831677(-)


>ENSBTAG00000011647
ATGAAATCCAACCCTGCCATCCAAGCTGCCATTGACCTCACGGCTGGGGCCGCAGGGGGCACAGCATGTGTCCTGACCGG
GCAGCCCTTCGACACCATGAAAGTGAAGATGCAGACATTCCCCGACCTGTACCGGGGCCTCACTGATTGCTGCCTCAAGA
CCTACTCCCAGGTGGGCTTCCGGGGCTTCTACAAAGGCACCAGCCCCGCGCTCATCGCCAACATCGCCGAGAACTCCGTC
CTCTTCATGTGCTACGGCTTCTGCCAGCAGGTGGTGCGGAAAGTGGTTGGATTGGACCGGCAGGCGAAGCTGAGTGATCT
GCAGAACGCAGCTGCTGGCTCCTTCGCCTCTGCCTTTGCTGCTCTGGTCCTCTGCCCCACAGAGCTGGTGAAGTGCCGAC
TGCAGACCATGTACGAGATGGAGACGTCGGGAAAGATAGCCAAAAGCCAGAACACAGTCTGGTCTGTCGTGAAGACTGTC
TTTAGGAAGGACGGCCCCTTGGGCTTCTACCATGGACTCTCAAGTACTTTACTTCGAGAAGTACCAGGCTACTTCTTCTT
TTTTGGTGGCTATGAACTAAGCCGGTCATTTTTTGCCTCGGGGAGATCGAAAGACGAATTAGGCCCTGTCCCTTTGATGT
TAAGTGGTGGATTTGGTGGAATCTGCCTGTGGCTTGCTGTTTACCCAGTGGATTGTATCAAATCTAGGATTCAAGTTCTT
TCCATGTCTGGGAAACAGGCGGGATTTATCGGAACCTTTATAAGCATCGTGAAAAATGAAGGAGTACCGGCCTTATATTC
TGGACTGAAACCTACCTTGATTCGCGCGTTCCCTGCCAATGGGGCTCTCTTCTTGGCCTATGAATACAGCAGGAAGTTGA
TGATGAACCAGTTTGAAGCATACTGA

Library Parental gene expression (RPM)
ERP005899_liver 32 .88 RPM
ERP005899_muscle 31 .57 RPM
SRP017611_brain 11 .10 RPM
SRP017611_kidney 21 .75 RPM
SRP017611_liver 27 .41 RPM
SRP030211_testis 3 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011723 ortholog_one2one 1 retrogene
retro_amel_5,
Canis familiaris ENSCAFG00000005955 ortholog_one2one 1 retrogene
retro_cfam_211,
Choloepus hoffmanni ENSCHOG00000004899 ortholog_one2one 3 retrogenes
retro_chof_1643, retro_chof_494, retro_chof_561,
Erinaceus europaeus ENSEEUG00000014870 ortholog_one2one 1 retrogene
retro_eeur_329,
Mus musculus ENSMUSG00000031482 ortholog_one2one 1 retrogene
retro_mmus_75,
Oryctolagus cuniculus ENSOCUG00000016684 ortholog_one2one 2 retrogenes
retro_ocun_192, retro_ocun_1927,
Ochotona princeps ENSOPRG00000014616 ortholog_one2one 1 retrogene
retro_opri_7,
Rattus norvegicus ENSRNOG00000011881 ortholog_one2one 1 retrogene
retro_rnor_130,
Sorex araneus ENSSARG00000002472 ortholog_one2one 1 retrogene
retro_sara_30,
Sus scrofa ENSSSCG00000009373 ortholog_one2one 1 retrogene
retro_sscr_688,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1581 82.72 100.00
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Download FASTA sequences of all ENSBTAG00000011647 retrocopies