Parental gene:

ENSEEUG00000014870

Aliases:None
Description:None
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_1574:4598..15903(+)


>ENSEEUG00000014870
GGTACGGCATGTGATCTGACCGGGCAACTTTTTGACACAATGAAGGTGAAGATGCAGACATTCCCTGACCTGTACAGGGG
CCTCACCGACTGCTGCTTGAAGACCTACTCCCAGGTGGGCTTCCGTGGCTTCTACAAGGGCACTAGCCCAGCGCTGATTG
CCAACATCGCCGAGAACTCTGTCCTCTTCATGTGCTACGGCTTCTGCCAGCAGGTGGTGCGGAAAGTGATTGGGCTGGAC
AGTCAGGCCAAGCTGAGTGACCTGCAGAATGCAGCTGCTGGCTCCTTTGCTTCTGCCTTCGCGGCGCTGGTGCTGTGCCC
CACTGAGCTGGTCAAGTGCCGGCTACAAACCATGTATGAGATGGAGTCATCGGGCAAGATAGCCAGGAGCCAGAACACAG
TTTGGTCTGTTGTCAAGAGTATCCTTAGCAAGGATGGCCCCTTGGGATTCTACCATGGACTCTCAAGCACTTTACTTCGA
GAAGTACCAGGGTATTTCTTCTTCTTTGGTGGCTATGAACTCAGCCGATCTTTCTTTGCCTCGGGGAGATCAAAAGATGA
ATTGGGCCCAGTCCCTTTGATGCTAAGTGGTGGTGTTGGTGGAATCTGCCTTTGGCTTGCTGTATACCCAGTGGATTGCA
TCAAATCCAGAATTCAAGTCCTTTCCATGTCTGGAAAACAGGCAGGATTTATCACCTTTATAAGTGTCTTGAAAAATGAA
GGAGTAACAGCCTTATATTCTGGACTGAAACCTACTATGATTCGCGCCTTCCCTGCCAACGGGGCCCTGTTTTTGGCCTA
TGAGTACAGCAGGAAGTTGATGATGGGCCAGTTTGAAGCATACTGA

Library Parental gene expression (RPM)
SRP017611_liver 147 .91 RPM
SRP017611_kidney 3 .38 RPM
SRP017611_brain 6 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011723 ortholog_one2one 1 retrogene
retro_amel_5,
Bos taurus ENSBTAG00000011647 ortholog_one2one 1 retrogene
retro_btau_1581,
Canis familiaris ENSCAFG00000005955 ortholog_one2one 1 retrogene
retro_cfam_211,
Choloepus hoffmanni ENSCHOG00000004899 ortholog_one2one 3 retrogenes
retro_chof_1643, retro_chof_494, retro_chof_561,
Mus musculus ENSMUSG00000031482 ortholog_one2one 1 retrogene
retro_mmus_75,
Oryctolagus cuniculus ENSOCUG00000016684 ortholog_one2one 2 retrogenes
retro_ocun_192, retro_ocun_1927,
Ochotona princeps ENSOPRG00000014616 ortholog_one2one 1 retrogene
retro_opri_7,
Rattus norvegicus ENSRNOG00000011881 ortholog_one2one 1 retrogene
retro_rnor_130,
Sorex araneus ENSSARG00000002472 ortholog_one2one 1 retrogene
retro_sara_30,
Sus scrofa ENSSSCG00000009373 ortholog_one2one 1 retrogene
retro_sscr_688,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_329 76.79 99.29
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Download FASTA sequences of all ENSEEUG00000014870 retrocopies