Parental gene:

UBE2N, ENSBTAG00000021767

Aliases:None
Description:Ubiquitin-conjugating enzyme E2 N [Source:UniProtKB/Swiss-Prot;Acc:Q0P5K3]
Organism:Cow (Bos taurus)
Coordinates:5:23370704..23411877(-)


>ENSBTAG00000021767
ATGGCCGGGCTGCCCCGCAGGATTATCAAGGAAACCCAGCGTTTGCTGGCAGAACCAGTTCCCGGCATTAAAGCAGAACC
AGATGAGAGCAACGCCCGTTATTTTCATGTGGTCATTGCCGGCCCTCAGGATTCCCCCTTTGAGGGAGGGACTTTTAAAC
TTGAACTATTCCTTCCAGAAGAATACCCAATGGCAGCCCCTAAAGTACGTTTCATGACCAAAATTTATCATCCTAATGTA
GACAAGTTGGGAAGAATATGTTTAGATATTTTGAAAGATAAGTGGTCCCCAGCACTGCAGATCCGCACAGTTCTGCTATC
GATCCAGGCTTTGTTAAGTGCTCCCAATCCAGATGATCCATTAGCAAATGATGTAGCGGAGCAATGGAAGACCAATGAAG
CCCAAGCCATAGAAACAGCTAGAGCATGGACTAGGCTATATGCCATGAATAATATTTAA

Library Parental gene expression (RPM)
ERP005899_liver 36 .99 RPM
ERP005899_muscle 57 .54 RPM
SRP017611_brain 62 .08 RPM
SRP017611_kidney 60 .63 RPM
SRP017611_liver 23 .41 RPM
SRP030211_testis 283 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000006177 possible_ortholog 1 retrogene
retro_cfam_196,
Callithrix jacchus ENSCJAG00000002979 ortholog_one2one 8 retrogenes
retro_cjac_141, retro_cjac_2121, retro_cjac_3142, retro_cjac_3148, retro_cjac_3216, retro_cjac_3241, retro_cjac_3329, retro_cjac_425,
Cavia porcellus ENSCPOG00000008581 possible_ortholog 5 retrogenes
retro_cpor_1548, retro_cpor_230, retro_cpor_24, retro_cpor_655, retro_cpor_750,
Echinops telfairi ENSETEG00000001882 ortholog_one2one 5 retrogenes
retro_etel_1008, retro_etel_1417, retro_etel_1593, retro_etel_1661, retro_etel_2136,
Homo sapiens ENSG00000177889 ortholog_one2one 3 retrogenes
retro_hsap_1392, retro_hsap_17, retro_hsap_3124,
Loxodonta africana ENSLAFG00000028985 possible_ortholog 1 retrogene
retro_lafr_57,
Macropus eugenii ENSMEUG00000002944 possible_ortholog 7 retrogenes
retro_meug_1236, retro_meug_1287, retro_meug_1453, retro_meug_1473, retro_meug_162, retro_meug_2009, retro_meug_31,
Macaca mulatta ENSMMUG00000020634 possible_ortholog 3 retrogenes
retro_mmul_1587, retro_mmul_234, retro_mmul_72,
Monodelphis domestica ENSMODG00000009451 ortholog_one2one 2 retrogenes
retro_mdom_133, retro_mdom_1485,
Mus musculus ENSMUSG00000074781 ortholog_one2one 6 retrogenes
retro_mmus_1031, retro_mmus_2656, retro_mmus_3031, retro_mmus_3294, retro_mmus_3510, retro_mmus_524,
Nomascus leucogenys ENSNLEG00000005695 ortholog_one2one 2 retrogenes
retro_nleu_1078, retro_nleu_2279,
Oryctolagus cuniculus ENSOCUG00000011287 possible_ortholog 1 retrogene
retro_ocun_100,
Pongo abelii ENSPPYG00000004832 ortholog_one2one 4 retrogenes
retro_pabe_113, retro_pabe_1152, retro_pabe_2580, retro_pabe_3326,
Pan troglodytes ENSPTRG00000005297 ortholog_one2one 3 retrogenes
retro_ptro_2112, retro_ptro_3253, retro_ptro_956,
Sarcophilus harrisii ENSSHAG00000007776 possible_ortholog 1 retrogene
retro_shar_105,
Sus scrofa ENSSSCG00000000908 ortholog_one2one 4 retrogenes
retro_sscr_101, retro_sscr_369, retro_sscr_698, retro_sscr_699,
Tarsius syrichta ENSTSYG00000008800 possible_ortholog 5 retrogenes
retro_tsyr_1476, retro_tsyr_1754, retro_tsyr_207, retro_tsyr_348, retro_tsyr_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1173 91.39 99.34
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2. retro_btau_1614 77.78 69.08
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Download FASTA sequences of all ENSBTAG00000021767 retrocopies