RetrogeneDB ID: | retro_etel_1417 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_262730:2..400(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000020140 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2N | ||
Ensembl ID: | ENSETEG00000001882 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2N [Source:HGNC Symbol;Acc:12492] |
Percent Identity: | 94.03 % |
Parental protein coverage: | 86.84 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | PGIKAEPDESNARYFHVVIAGP-QDSPFEGGTF-KLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICL |
PGIKAEPDESNARYFHVVIAGP.Q..P..G..F.KLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICL | |
Retrocopy | PGIKAEPDESNARYFHVVIAGP>QGFPL*GRDF>KLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICL |
Parental | DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNNI |
DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNNI | |
Retrocopy | DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNNI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |