RetrogeneDB ID: | retro_etel_2136 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_73033:205..657(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000000969 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2N | ||
Ensembl ID: | ENSETEG00000001882 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2N [Source:HGNC Symbol;Acc:12492] |
Percent Identity: | 90.85 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAGLPRRIIKETQRLLAEPVPGIKA-EPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKV |
MAGLPRRIIK.TQ.LLAEPVPGI...EPDESNA.YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMA.PKV | |
Retrocopy | MAGLPRRIIKDTQHLLAEPVPGITR<EPDESNAHYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAVPKV |
Parental | RFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIET |
RFMTKIYHP.VDKLGRICL.ILK.KWSPALQI.TV.LSIQALLSAPN..DPLANDVAEQWKTNEAQAIET | |
Retrocopy | RFMTKIYHPKVDKLGRICLAILKGKWSPALQICTV-LSIQALLSAPNANDPLANDVAEQWKTNEAQAIET |
Parental | ARAWTRLYAMNNI |
ARAWTRLYAMNNI | |
Retrocopy | ARAWTRLYAMNNI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |