Parental gene:

NME2, ENSBTAG00000047186

Aliases:None
Description:Nucleoside diphosphate kinase B [Source:UniProtKB/Swiss-Prot;Acc:Q3T0Q4]
Organism:Cow (Bos taurus)
Coordinates:19:36214292..36217603(-)


>ENSBTAG00000047186
ATGGCCCACGCGGAGCGCACCTTTATTGCTATCAAGCCGGACGGCGTGCAGCGCGGCCTGGTGGGCGAGATCATCAAGCG
CTTCGAGCAGAAGGGATTCCGCCTTGTGGCCATGAAGTTCCTTCAGGCCTCTGAGGAACTCCTGAAGCAGCACTACATTG
ACCTGAAAGACCGCCCATTCTTTCCCGGCCTGGTGAAGTACATGAACTCAGGGCCAGTTGTGGCCATGGTCTGGGAGGGC
CTGAATGTAGTGAAGACAGGACGAGTGATGCTTGGGGAGACCAACCCAGCAGATTCTAAGCCGGGCACCATTCGTGGTGA
CTTCTGCATTCAAGTTGGCAGGTAA

Library Parental gene expression (RPM)
SRP017611_brain 16 .31 RPM
SRP017611_kidney 28 .45 RPM
SRP017611_liver 10 .50 RPM
ERP005899_muscle 61 .55 RPM
ERP005899_liver 3 .82 RPM
SRP030211_testis 7 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008022 ortholog_one2one 3 retrogenes
retro_amel_1573, retro_amel_390, retro_amel_538,
Bos taurus ENSBTAG00000004651 within_species_paralog 1 retrogene
retro_btau_1707,
Equus caballus ENSECAG00000021658 ortholog_one2one 1 retrogene
retro_ecab_404,
Felis catus ENSFCAG00000006742 ortholog_one2one 5 retrogenes
retro_fcat_1083, retro_fcat_1117, retro_fcat_1475, retro_fcat_216, retro_fcat_663,
Homo sapiens ENSG00000011052 possible_ortholog 1 retrogene
retro_hsap_1063,
Loxodonta africana ENSLAFG00000007784 ortholog_one2one 1 retrogene
retro_lafr_636,
Myotis lucifugus ENSMLUG00000016929 ortholog_one2one 3 retrogenes
retro_mluc_1422, retro_mluc_1882, retro_mluc_637,
Macaca mulatta ENSMMUG00000001940 possible_ortholog 1 retrogene
retro_mmul_1827,
Mustela putorius furo ENSMPUG00000015573 ortholog_one2one 4 retrogenes
retro_mputfur_1236, retro_mputfur_1590, retro_mputfur_327, retro_mputfur_912,
Mus musculus ENSMUSG00000020857 possible_ortholog 1 retrogene
retro_mmus_221,
Rattus norvegicus ENSRNOG00000002671 possible_ortholog 8 retrogenes
retro_rnor_1129, retro_rnor_1610, retro_rnor_1708, retro_rnor_1784, retro_rnor_1966, retro_rnor_2646, retro_rnor_2951, retro_rnor_628,
Sus scrofa ENSSSCG00000017591 ortholog_one2one 1 retrogene
retro_sscr_854,
Tupaia belangeri ENSTBEG00000013053 possible_ortholog 6 retrogenes
retro_tbel_1271, retro_tbel_1386, retro_tbel_2497, retro_tbel_294, retro_tbel_4620, retro_tbel_820,
Tursiops truncatus ENSTTRG00000007433 ortholog_one2one 1 retrogene
retro_ttru_1821,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1329 98.20 96.49
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000047186 retrocopies