Parental gene:

NME2, ENSECAG00000021658

Aliases:None
Description:nucleoside diphosphate kinase B [Source:RefSeq peptide;Acc:NP_001191672]
Organism:Horse (Equus caballus)
Coordinates:11:26692477..26707469(+)


>ENSECAG00000021658
ATGCGCGCTTCTGAAGACCTCCTCAAGGAACACTACAACGACCTGAAGGACCGTCCGTTCTTTGCCGGGCTGGTGAAATA
TATGCACTCGGGGCCAGTGGTTGCCATGGTCTGGGAGGGGCTGAATGTTGTGAAGACAGGCCGAGTGATGCTCGGGGAGA
CCAACCCTGCGGACTCCAAGCCTGGGACCATCCGTGGGGATTTTTGCATCCAAGTTGGCAGGACCATGGCCAACGTGGAG
CGCACCTTCATCGCCATCAAGCCGGATGGTGTGCAGCGCAGCCTGGTGGGTGAGATCATCAAGCGCTTCGAGCAGAAGGG
ATTCCGCCTCGTGGCCATGAAGTTACTCCAGGCCTCTGAGGACCTCCTGAAGCAGCACTACGTTGACCTGAAAGACCGCC
CATTCTTCCCCGGGCTGGTGAAGTACATGCACTCTGGCCCCATCGTGGCCATGGTCTGGGAGGGGCTGAATGTGGTGAAG
ACAGGGCGAGTGATGCTCGGAGAGACCAATCCAGCAGATTCCAAGCCGGGCACCATTCGCGGGGACTTCTGCATTCAAGT
TGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCTGAGAAAGAAATCAGCCTCTGGTTTAAGCCTGAAGAAT
TGGTTGACTACAAGTCTTGTGCTTTTGACTGGATCTATGAATGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 135 .26 RPM
SRP021940_embryo 104 .67 RPM
SRP021940_cerebellum 71 .20 RPM
SRP021940_testis 48 .98 RPM
SRP021940_placental_villous 89 .53 RPM
SRP021940_articular_cartilage 51 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008022 ortholog_one2one 3 retrogenes
retro_amel_1573, retro_amel_390, retro_amel_538,
Bos taurus ENSBTAG00000047186 ortholog_one2one 1 retrogene
retro_btau_1329,
Erinaceus europaeus ENSEEUG00000003783 ortholog_one2many 2 retrogenes
retro_eeur_156, retro_eeur_5,
Felis catus ENSFCAG00000006742 ortholog_one2one 5 retrogenes
retro_fcat_1083, retro_fcat_1117, retro_fcat_1475, retro_fcat_216, retro_fcat_663,
Homo sapiens ENSG00000011052 possible_ortholog 1 retrogene
retro_hsap_1063,
Loxodonta africana ENSLAFG00000007784 ortholog_one2one 1 retrogene
retro_lafr_636,
Myotis lucifugus ENSMLUG00000016929 ortholog_one2one 3 retrogenes
retro_mluc_1422, retro_mluc_1882, retro_mluc_637,
Macaca mulatta ENSMMUG00000001940 possible_ortholog 1 retrogene
retro_mmul_1827,
Mustela putorius furo ENSMPUG00000015573 ortholog_one2one 4 retrogenes
retro_mputfur_1236, retro_mputfur_1590, retro_mputfur_327, retro_mputfur_912,
Mus musculus ENSMUSG00000020857 possible_ortholog 1 retrogene
retro_mmus_221,
Rattus norvegicus ENSRNOG00000002671 possible_ortholog 8 retrogenes
retro_rnor_1129, retro_rnor_1610, retro_rnor_1708, retro_rnor_1784, retro_rnor_1966, retro_rnor_2646, retro_rnor_2951, retro_rnor_628,
Sus scrofa ENSSSCG00000017591 ortholog_one2many 1 retrogene
retro_sscr_854,
Tupaia belangeri ENSTBEG00000013053 possible_ortholog 6 retrogenes
retro_tbel_1271, retro_tbel_1386, retro_tbel_2497, retro_tbel_294, retro_tbel_4620, retro_tbel_820,
Tursiops truncatus ENSTTRG00000007433 ortholog_one2one 1 retrogene
retro_ttru_1821,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_404 57.45 60.79
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000021658 retrocopies