RetrogeneDB ID: | retro_mputfur_1236 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897050.1:1158926..1159437(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000015573 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.39 % |
Parental protein coverage: | 93.96 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | PGSCVPEAAGPEPTCRPQAMAHQERTFIAIKPDGVQRGLVGEII-KRFEQKGFRLVAMKFLQASQELLKQ |
P....P..........P......E..F.AIKPDGVQ..L.GEI....FEQKGF...AMK..QAS...LK. | |
Retrocopy | PVPAAPDGVATGGLSIPRSKGNSEHAFTAIKPDGVQCSLLGEIM<ECFEQKGFLPIAMKRIQASEDFLKE |
Parental | HYIDLK-DRP-FFP-GLVKYMNSGPVVAMVWEGLNVVKTG-RMMLGETNPADSKPGTIRGDFCIQVGRNI |
H.IDLK.D.P.F.P.GLVKY..SGPVVAM...GLNV.KT....ML.ETNP..S.PGTI.GDFC.QV.RNI | |
Retrocopy | HDIDLK<DYPFFVP<GLVKYLRSGPVVAMARKGLNV-KTD>KVMLWETNPSYSNPGTIHGDFCLQVVRNI |
Parental | IHGSDSVKSAEKEISLWFKPEELVDYKSCAFDWIYE |
.H.S.SV.SAEKE..L.F.PEELVD.KSCA...I.E | |
Retrocopy | THDSNSV*SAEKETGL*FWPEELVD*KSCAQNRIHE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000008022 | 3 retrocopies | |
Bos taurus | ENSBTAG00000047186 | 1 retrocopy | |
Equus caballus | ENSECAG00000021658 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000003783 | 2 retrocopies | |
Felis catus | ENSFCAG00000006742 | 5 retrocopies | |
Homo sapiens | ENSG00000011052 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000007784 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000016929 | 3 retrocopies | |
Macaca mulatta | ENSMMUG00000001940 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000015559 | 5 retrocopies | |
Mustela putorius furo | ENSMPUG00000015573 | 4 retrocopies | |
Mustela putorius furo | ENSMPUG00000016017 | 3 retrocopies | |
Mus musculus | ENSMUSG00000020857 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000002671 | 8 retrocopies | |
Sus scrofa | ENSSSCG00000017591 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000013053 | 6 retrocopies | |
Tursiops truncatus | ENSTTRG00000007433 | 1 retrocopy |