Parental gene: | PAFAH1B3, ENSCAFG00000004847 |
| Aliases: | None |
| Description: | platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) [Source:HGNC Symbol;Acc:8576] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 1:112078677..112080834(+) |
>ENSCAFG00000004847
GGCGCCAAGATGAGCGGAGAGGAGAACCCAGCCAGCAAGCCGACGCCGGTGCAGGACGTGCAGGGCGACGGACGCTGGAT
GTCCCTGCACCATCGGTTCGTGGCCGACAGCAAAGATAAGGAACCCGAAGTCGTCTTCATCGGGGACTCCTTGGTCCAGC
TAATGCACCAGTGCGAGATCTGGCGGGAGCTTTTTTCTCCTCTGCACGCGCTTAACTTTGGCATTGGCAGTGACAGCACG
CAACATGTGCTTTGGCGGCTGGAGAATGGTGAGCTGGAACACATCCGGCCCAAGATTGTGGTGGTCTGGGTGGGTACCAA
CAACCATGGGCACACAGCAGAGCAAGTGACTGGTGGCATCAAGGCCATTGTGCAACTGGTGAACCAACGACAGCCCCAGG
CCCGGGTTGTGGTGCTGGGCCTGCTTCCAAGGGGCCAGCACCCTAACCCACTTCGTGAGAAAAACCGGCGGGTGAACGAG
CTGGTCCGAGCGGCACTGGCTGGCCACCCACGGGCGCACTTCCTGGATGCCGACCCTGGCTTTGTGCACTCAGACGGCAC
CATAAGCCACCATGACATGTACGATTACCTGCATCTGAGCCGCCTGGGCTACACACCTGTCTGTCGGGCCCTGCACTCCC
TGCTTCTGCGTCTGCTGGCCCAAGACCAGGGCCAGGGCATCCCCCTGCCAGAAGCTACACCCTAA
GGCGCCAAGATGAGCGGAGAGGAGAACCCAGCCAGCAAGCCGACGCCGGTGCAGGACGTGCAGGGCGACGGACGCTGGAT
GTCCCTGCACCATCGGTTCGTGGCCGACAGCAAAGATAAGGAACCCGAAGTCGTCTTCATCGGGGACTCCTTGGTCCAGC
TAATGCACCAGTGCGAGATCTGGCGGGAGCTTTTTTCTCCTCTGCACGCGCTTAACTTTGGCATTGGCAGTGACAGCACG
CAACATGTGCTTTGGCGGCTGGAGAATGGTGAGCTGGAACACATCCGGCCCAAGATTGTGGTGGTCTGGGTGGGTACCAA
CAACCATGGGCACACAGCAGAGCAAGTGACTGGTGGCATCAAGGCCATTGTGCAACTGGTGAACCAACGACAGCCCCAGG
CCCGGGTTGTGGTGCTGGGCCTGCTTCCAAGGGGCCAGCACCCTAACCCACTTCGTGAGAAAAACCGGCGGGTGAACGAG
CTGGTCCGAGCGGCACTGGCTGGCCACCCACGGGCGCACTTCCTGGATGCCGACCCTGGCTTTGTGCACTCAGACGGCAC
CATAAGCCACCATGACATGTACGATTACCTGCATCTGAGCCGCCTGGGCTACACACCTGTCTGTCGGGCCCTGCACTCCC
TGCTTCTGCGTCTGCTGGCCCAAGACCAGGGCCAGGGCATCCCCCTGCCAGAAGCTACACCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 10 .48 RPM |
| SRP017611_kidney | 6 .87 RPM |
| SRP017611_liver | 1 .52 RPM |
| SRP012049_cerebellum | 63 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019787 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000013226 | within_species_paralog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002870 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012172 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007574 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020481 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_610 | 70.94 | 99.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000004847 retrocopies