Parental gene: | PAFAH1B3, ENSDNOG00000002870 |
| Aliases: | None |
| Description: | platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) [Source:HGNC Symbol;Acc:8576] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1477:46310..48839(-) |
>ENSDNOG00000002870
ATGAGGGGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGTGCAGGACGTGCAGGGCGACGGGCGCTGGATGTCCCTGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCACGTG
CTGTGGCGGCTGGAGAATGGAGATCATGAACACATCCGGCCCAAAATTGTGGTGGTCTGGGTGGGCACCAACAACCACGG
GCACACAGCAGAGCAGGTCACTGGCGGCATCGAGGCCATTGTACAACTGGTGAACCAGCGGCAGCCCCAGGCCCGGGTCG
TGGTGTTGGGCTTGCTCCCACGGGGCCAGCATCCCAACCCACTTCGAGAGAAGAACCAACAGGTCAACAAGCTGGTCCGG
GTGGCACTGGCTGGCCACCCAAGGGCACACTTCCTGGATGCTGATCCTGGCTTTGTGCACTCAGATGGCACCATAAGCCA
CCATGACATGTATGATTACCTGCACCTGAGCCGCCTGGGATACACACCCGTATGTCGGGCCCTGCACTCCCTGCTGCTGC
GTCTGCTGGCCCAAGACCAGGGCCAGGGCCCCCCACTGCCAGAGCCCACATCCTGA
ATGAGGGGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGTGCAGGACGTGCAGGGCGACGGGCGCTGGATGTCCCTGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCACGTG
CTGTGGCGGCTGGAGAATGGAGATCATGAACACATCCGGCCCAAAATTGTGGTGGTCTGGGTGGGCACCAACAACCACGG
GCACACAGCAGAGCAGGTCACTGGCGGCATCGAGGCCATTGTACAACTGGTGAACCAGCGGCAGCCCCAGGCCCGGGTCG
TGGTGTTGGGCTTGCTCCCACGGGGCCAGCATCCCAACCCACTTCGAGAGAAGAACCAACAGGTCAACAAGCTGGTCCGG
GTGGCACTGGCTGGCCACCCAAGGGCACACTTCCTGGATGCTGATCCTGGCTTTGTGCACTCAGATGGCACCATAAGCCA
CCATGACATGTATGATTACCTGCACCTGAGCCGCCTGGGATACACACCCGTATGTCGGGCCCTGCACTCCCTGCTGCTGC
GTCTGCTGGCCCAAGACCAGGGCCAGGGCCCCCCACTGCCAGAGCCCACATCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 34 .81 RPM |
| SRP012922_cerebellum | 38 .63 RPM |
| SRP012922_heart | 4 .18 RPM |
| SRP012922_kidney | 32 .31 RPM |
| SRP012922_liver | 6 .50 RPM |
| SRP012922_lung | 37 .11 RPM |
| SRP012922_quadricep_muscle | 5 .54 RPM |
| SRP012922_spleen | 27 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019787 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004847 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012172 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007574 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020481 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1276 | 63.38 | 61.04 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000002870 retrocopies