Parental gene: | PAFAH1B3, ENSMMUG00000012172 |
| Aliases: | None |
| Description: | platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) [Source:RefSeq peptide;Acc:NP_001244209] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 19:48617074..48623808(-) |
>ENSMMUG00000012172
ATGAGCCGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGTGCAGGACGTACAGGGCGACGGGCGCTGGATGTCCCTGCA
CCATCGGTTCGTGGCTGACAGCAAAGATAAAGAACCCGAAGTCGTCTTCATCGGGGACTCCTTGGTCCAGCTAATGCACC
AGTGCGAGATCTGGCGGGAGCTCTTTTCTCCTCTGCACGCACTTAACTTTGGCATCGGTGGTGATGGCACACAGCATGTA
CTGTGGCGGCTGGAGAATGGGGAGCTGGAACACATCCGGCCCAAGATTGTGGTGGTCTGGGTGGGCACCAACAACCACGG
ACACACAGCAGAGCAGGTGACTGGTGGCATCAAGGCCATTGTGCAACTGGTGAATGAGCGGCAGCCCCAGGCCCGGGTTG
TGGTGCTGGGTCTGCTTCCGCGAGGCCAGCATCCCAACCCACTTCGGGAGAAGAACCGACGCGTGAATGAGCTGGTACGG
GCAGCATTGGCTGGCCATCCTCGGGCCCACTTCCTAGATGCCGACCCTGGCTTTGTGCACTCAGATGGCACCATCAGCCA
CCATGACATGTATGATTACCTACATCTGAGCCGCCTGGGCTACACACCTGTTTGCCGGGCTCTGCACTCCCTGCTTCTAC
GTCTGCTGGCCCAAGACCAGGGCCAAGGTGCTCCCCTGCTGGAGCCCGCACCCTAA
ATGAGCCGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGTGCAGGACGTACAGGGCGACGGGCGCTGGATGTCCCTGCA
CCATCGGTTCGTGGCTGACAGCAAAGATAAAGAACCCGAAGTCGTCTTCATCGGGGACTCCTTGGTCCAGCTAATGCACC
AGTGCGAGATCTGGCGGGAGCTCTTTTCTCCTCTGCACGCACTTAACTTTGGCATCGGTGGTGATGGCACACAGCATGTA
CTGTGGCGGCTGGAGAATGGGGAGCTGGAACACATCCGGCCCAAGATTGTGGTGGTCTGGGTGGGCACCAACAACCACGG
ACACACAGCAGAGCAGGTGACTGGTGGCATCAAGGCCATTGTGCAACTGGTGAATGAGCGGCAGCCCCAGGCCCGGGTTG
TGGTGCTGGGTCTGCTTCCGCGAGGCCAGCATCCCAACCCACTTCGGGAGAAGAACCGACGCGTGAATGAGCTGGTACGG
GCAGCATTGGCTGGCCATCCTCGGGCCCACTTCCTAGATGCCGACCCTGGCTTTGTGCACTCAGATGGCACCATCAGCCA
CCATGACATGTATGATTACCTACATCTGAGCCGCCTGGGCTACACACCTGTTTGCCGGGCTCTGCACTCCCTGCTTCTAC
GTCTGCTGGCCCAAGACCAGGGCCAAGGTGCTCCCCTGCTGGAGCCCGCACCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 23 .01 RPM |
| SRP007412_brain | 3 .92 RPM |
| SRP007412_cerebellum | 3 .87 RPM |
| SRP007412_heart | 0 .82 RPM |
| SRP007412_kidney | 2 .23 RPM |
| SRP007412_liver | 2 .06 RPM |
| SRP007412_testis | 2 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019787 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004847 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002870 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002050 | within_species_paralog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000007574 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020481 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_18 | 99.57 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000012172 retrocopies