Parental gene: | BCCIP, ENSCAFG00000012873 |
| Aliases: | None |
| Description: | BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:978] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 28:34983649..34998963(+) |
>ENSCAFG00000012873
ATGGCGTCCAGGCCCAAGCGGCGCGCGGTGGGCAGCGCGGCTCCGCAGCCCCCGGGCGGCCTGGCAGTGCGCGCCGAGGA
GGAAGAGGAAGACGGAGTGGAAGATGAGGACGAAGACGAGGAAGACAGCGACGAAGACGAGGATGAAGACGACGAGAGCG
TCGACGAGGAAGTGAATGTTGAATTTGAAGCTTATTCCATCTCTGACAAGGATCATGACGGAATTAAGAAGTTATTGCAA
CAGCTTTTCCTAAAGGCTCCTGTGAACACTGCAGAACTAACTGATCTCTTAATTCAACAAAACCATATTGGGAGTGTGAT
AAAGCAGACGGATGTTTCAGAAGACAGCGATGACGATGTGGATGAAGATGAGATTTTTGGGTTCATAAGTCTTTTAAATT
TAACTGAAAGAAAGGGAACCCAGTGTGTTGAACAAATTAAAGAGCTGATCCTGAGCTCCTGTGAGAAGAACTGTGGAAAG
AGTTTGGTGGAACAGCTGGATACACTTTTAAACGACAACTCCAAGCCTGTGGGCTTTCTCCTCAGCGAGAGGTTCATTAA
CGTCCCTCCTCAGATTGCGCTGCCCATGCACCAGCAGCTCCAGAAAGAACTAGCAGAGGCACACAAAACTAACAAGCCGT
GTGGGAAGTGTTACTTCTACCTTCTGATTAGCAAGACGTTTGTGGAAGCTGGAAAAAATTCCAAAAAGAAAGGGAGCAAC
CAAGAAGAAAAAGAGGAGTTAATGTTTGCAAATGCAGAGGAAGAATTTTTCTATGAGAAGGCCATCCTGAAGTTCAGCTA
CTCGGTGCAGGAAGAGAGCGACACTCGTCTGGGAGGCAGGTGGTCCTTTGATGACGTCCCCATGAAGCCCTTGCGAACCG
TGATGTTGATTCCAGGTGACCGGATGGACGAAATCATGGACAGACTGAAAGAGCACCTCTCCGTGTGA
ATGGCGTCCAGGCCCAAGCGGCGCGCGGTGGGCAGCGCGGCTCCGCAGCCCCCGGGCGGCCTGGCAGTGCGCGCCGAGGA
GGAAGAGGAAGACGGAGTGGAAGATGAGGACGAAGACGAGGAAGACAGCGACGAAGACGAGGATGAAGACGACGAGAGCG
TCGACGAGGAAGTGAATGTTGAATTTGAAGCTTATTCCATCTCTGACAAGGATCATGACGGAATTAAGAAGTTATTGCAA
CAGCTTTTCCTAAAGGCTCCTGTGAACACTGCAGAACTAACTGATCTCTTAATTCAACAAAACCATATTGGGAGTGTGAT
AAAGCAGACGGATGTTTCAGAAGACAGCGATGACGATGTGGATGAAGATGAGATTTTTGGGTTCATAAGTCTTTTAAATT
TAACTGAAAGAAAGGGAACCCAGTGTGTTGAACAAATTAAAGAGCTGATCCTGAGCTCCTGTGAGAAGAACTGTGGAAAG
AGTTTGGTGGAACAGCTGGATACACTTTTAAACGACAACTCCAAGCCTGTGGGCTTTCTCCTCAGCGAGAGGTTCATTAA
CGTCCCTCCTCAGATTGCGCTGCCCATGCACCAGCAGCTCCAGAAAGAACTAGCAGAGGCACACAAAACTAACAAGCCGT
GTGGGAAGTGTTACTTCTACCTTCTGATTAGCAAGACGTTTGTGGAAGCTGGAAAAAATTCCAAAAAGAAAGGGAGCAAC
CAAGAAGAAAAAGAGGAGTTAATGTTTGCAAATGCAGAGGAAGAATTTTTCTATGAGAAGGCCATCCTGAAGTTCAGCTA
CTCGGTGCAGGAAGAGAGCGACACTCGTCTGGGAGGCAGGTGGTCCTTTGATGACGTCCCCATGAAGCCCTTGCGAACCG
TGATGTTGATTCCAGGTGACCGGATGGACGAAATCATGGACAGACTGAAAGAGCACCTCTCCGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 16 .04 RPM |
| SRP017611_kidney | 44 .24 RPM |
| SRP017611_liver | 15 .59 RPM |
| SRP012049_cerebellum | 37 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012411 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002939 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008541 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008761 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010901 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011828 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002570 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1356 | 94.25 | 82.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000012873 retrocopies