Parental gene: | BCCIP, ENSSTOG00000011828 |
| Aliases: | None |
| Description: | BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:978] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393296.1:13817022..13830855(+) |
>ENSSTOG00000011828
ATGGCGTCCCGGGCCAAACGACGGGCCTTGGGGAACGGATCCCCGCGGCCTCCCGGAGACCCCGTCCGGCACGACGACGA
AGAAGGGGAGGATGAAGTCGAGGATGAAGACGAAGACGATGAGGAGAGTGACGAAGAAGAGGACGAAGACGACGAGGTCC
TTGACGAGGAAGTGAATATTGAATTTGAAGCTTATTCCATCTCAGATAATGATTATGACGGAATTAAGAAATTACTGCAG
CAGCTTTTCCTAAAGGCTCCTGTGAACACTGCAGAACTAACAGATCTCTTAATTCAACAGAACCATATTGGAAGTGTGAT
TAAGCAAACAAATGTTTCAGAAGACAGCGATGATGATGATGCAGATGAAGATGAAATTTTTGGTTTCATAAGCCTTTTAA
ATTTAACTGAAAGAAAGGGTACCCAGTGTGCTGAACAAATTAAAGAGTTGGTTCTAAGCTTCTGTGAGAAGAACTGTGAA
AAGAGTGTGGTTGAACAGCTGGACAAGCTTTTAAATGACACCACCAAGCCTGTGGGCTTTCTCCTAAGTGAAAGATTCAT
TAATGTCCCTCCTCAGATTGCTCTGCCCATGCACCAGCAGCTTCAGAAAGAACTAGTAGAGTCACACAAAACTAATAAGC
CATGTGGGAAGTGCTCTTTCTACCTTCTGATTAGTAAGACATTTGTGGAAGCAGGAAAATCCAATTCCAAAAAGAAATGG
AGCAACCAGAAGGATGAATTAATGTTTGTAAATGCAGAGGAAGAGTTTTTTTATGAGGTAATAGAAGGCAGTCCTGAAGT
T
ATGGCGTCCCGGGCCAAACGACGGGCCTTGGGGAACGGATCCCCGCGGCCTCCCGGAGACCCCGTCCGGCACGACGACGA
AGAAGGGGAGGATGAAGTCGAGGATGAAGACGAAGACGATGAGGAGAGTGACGAAGAAGAGGACGAAGACGACGAGGTCC
TTGACGAGGAAGTGAATATTGAATTTGAAGCTTATTCCATCTCAGATAATGATTATGACGGAATTAAGAAATTACTGCAG
CAGCTTTTCCTAAAGGCTCCTGTGAACACTGCAGAACTAACAGATCTCTTAATTCAACAGAACCATATTGGAAGTGTGAT
TAAGCAAACAAATGTTTCAGAAGACAGCGATGATGATGATGCAGATGAAGATGAAATTTTTGGTTTCATAAGCCTTTTAA
ATTTAACTGAAAGAAAGGGTACCCAGTGTGCTGAACAAATTAAAGAGTTGGTTCTAAGCTTCTGTGAGAAGAACTGTGAA
AAGAGTGTGGTTGAACAGCTGGACAAGCTTTTAAATGACACCACCAAGCCTGTGGGCTTTCTCCTAAGTGAAAGATTCAT
TAATGTCCCTCCTCAGATTGCTCTGCCCATGCACCAGCAGCTTCAGAAAGAACTAGTAGAGTCACACAAAACTAATAAGC
CATGTGGGAAGTGCTCTTTCTACCTTCTGATTAGTAAGACATTTGTGGAAGCAGGAAAATCCAATTCCAAAAAGAAATGG
AGCAACCAGAAGGATGAATTAATGTTTGTAAATGCAGAGGAAGAGTTTTTTTATGAGGTAATAGAAGGCAGTCCTGAAGT
T
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012873 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012411 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002939 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008541 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008761 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010901 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002570 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_559 | 91.83 | 77.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1004 | 90.34 | 77.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1130 | 89.20 | 65.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_1513 | 58.94 | 54.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000011828 retrocopies